# Specify database: feather_database_url='https://resources.aertslab.org/cistarget/databases/homo_sapiens/hg38/screen/mc_v10_clust/region_based/hg38_screen_v10_clust.regions_vs_motifs.rankings.feather' # feather_database_url='https://resources.aertslab.org/cistarget/databases/homo_sapiens/hg38/screen/mc_v10_clust/region_based/hg38_screen_v10_clust.regions_vs_motifs.scores.feather' # Download database with zsync_curl: "${ZSYNC_CURL}" "${feather_database_url}.zsync"
Alternatively, you can download the databases directly:
# Specify database: feather_database_url='https://resources.aertslab.org/cistarget/databases/homo_sapiens/hg38/screen/mc_v10_clust/region_based/hg38_screen_v10_clust.regions_vs_motifs.rankings.feather' # feather_database_url='https://resources.aertslab.org/cistarget/databases/homo_sapiens/hg38/screen/mc_v10_clust/region_based/hg38_screen_v10_clust.regions_vs_motifs.scores.feather' feather_database="${feather_database_url##*/}" # Download database directly (with wget or curl): wget "${feather_database_url}" # curl -O "${feather_database_url}" # Download sha256sum.txt (with wget or curl): wget https://resources.aertslab.org/cistarget/databases/sha256sum.txt # curl -O https://resources.aertslab.org/cistarget/databases/sha256sum.txt # Check if sha256 checksum matches for the downloaded database: awk -v feather_database=${feather_database} '$2 == feather_database' sha256sum.txt | sha256sum -c - # If you downloaded mulitple databases, you can check them all at onces with: sha256sum -c sha256sum.txt
Name | Last modified | Size | Description | |
---|---|---|---|---|
Parent Directory | - | |||
hg38_screen_v10_clust.regions_vs_motifs.scores.feather.sha1sum.txt | 2022-10-10 14:15 | 97 | ||
hg38_screen_v10_clust.regions_vs_motifs.scores.feather | 2022-07-07 16:31 | 13G | ||
hg38_screen_v10_clust.regions_vs_motifs.rankings.feather.sha1sum.txt | 2022-10-10 14:19 | 99 | ||
hg38_screen_v10_clust.regions_vs_motifs.rankings.feather | 2022-07-07 16:35 | 33G | ||
Stein Aerts lab, 2022-2023